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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015812114.1_cds_XP_016497003.1_11170
CDS Infomation

[gene=LOC107815871] [db_xref=GeneID:107815871] [protein=serine/threonine-protein kinase AFC1-like] [protein_id=XP_016497003.1] [location=join(10639..10761,12228..12399,13360..13386,14013..14166,14250..14298,14413..14527,14743..14834,21260..21416,21496..21560,22913..23010,23098..23203,23835..23993)] [gbkey=CDS]
Sequence

ATGGAAACCCAACCATTAATGGAATTTCCTCGGAGAAATATAGATAAGCGACCTCGAAAA
CGGCCTCGTTTGGCATGGGACGTAGGGCCTCCAATTCAGCCTCCAATTCCACCAATTCCC
AAGGTTCTTCCAACAATATACTGTGGGCAAGAGTTTGGGAACGGAGCATTGCTGAACTAT
GCTTATTCTTCAATATATTACAAGGGTATCCCTCATAATGGATCTCCTCCTCGGAGACCA
GATGATAAAGATGGCCACTATGTTTTTGCGATTGGGGAAACCTTAACTCTTCGCTATAGG
ATACTCAGCAAAATGGGGGAAGGGACTTTTGGACAAGTCCTTGAATGCCTAGACAATGAA
ACAAAGGAACTTGTGGCAATTAAAGTTGTTCGTTCTATACATAAATACCGAGAAGCGGCA
ATGATTGAAATAGATGTCCTTCAGAAACTTGCCAGGCATGATCTTGGTGGCAAACATTGT
GTGCAAATAAGGAATTGGTTTGACTATCGTAATCATATATGTATTGTTTTTGAGAAGCTT
GGTCCAAGCTTATACGATTTTCTTCGCAAAAACAGCTATCGTTCATTTCCCATTGATCTT
GTCCGGGAGTTTGGCAGACAACTTTTGGAGTCTGTAGCATTTATGCATGATCTGCGACTG
ATTCACACTGATCTGAAGCCAGAAAATATTCTCCTTGTTTCGTCAGAGTATCTTAAAGTT
CCAGATTACAAGTTCCTGCTGCGACCTGCAAAAGATGGTTCCTACTTCAAGAATGTACCA
ACGTCAAGTGCTATTAAGCTCATTGACTTCGGCAGTACTACGTTTGAACATCAGGATCAT
ACTTATGTGGTGTCTACACGTCATTACCGTGCTCCAGAGGTTATTTTAGGTCTTGGATGG
AACTATCCTTGTGATATGTGGAGTATAGGTTGCATACTTGTTGAGCTTTGCTCTGGTGAG
GCTCTTTTTCAAACACATGAGAACTTAGAACATCTCGCAATGATGGAAAAGGTGCTAGGG
CCTCTTCCTCAGCACATGTCTGTGAGAGCTGACCGCCGTGCTGAGAAATATTTTAGAAGG
GGTGCAAGGTTGGATTGGCCAGAGCGTGCAACTTCAAGTGAAAGTATGAGGGCTGTCTGG
AAATTGCCTCGTCTCCAGAACCTAATAATGCAGCATGTGGACCACTCTGCTGGAGATCTC
ATTGATCTTCTGCAAGGGCTGCTTTGTTATGACCCAACAGAACGGCTGAAAGCTAGAGAA
GCATTACGGCACCCCTTCTTCACTAGAGACCTGAGAAGGTGTGGTTATCCAATGTAA

Peptide Sequence

PEP ID

XP_016497003.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase AFC1-like [Nicotiana tabacum]
Sequence

METQPLMEFPRRNIDKRPRKRPRLAWDVGPPIQPPIPPIPKVLPTIYCGQEFGNGALLNY
AYSSIYYKGIPHNGSPPRRPDDKDGHYVFAIGETLTLRYRILSKMGEGTFGQVLECLDNE
TKELVAIKVVRSIHKYREAAMIEIDVLQKLARHDLGGKHCVQIRNWFDYRNHICIVFEKL
GPSLYDFLRKNSYRSFPIDLVREFGRQLLESVAFMHDLRLIHTDLKPENILLVSSEYLKV
PDYKFLLRPAKDGSYFKNVPTSSAIKLIDFGSTTFEHQDHTYVVSTRHYRAPEVILGLGW
NYPCDMWSIGCILVELCSGEALFQTHENLEHLAMMEKVLGPLPQHMSVRADRRAEKYFRR
GARLDWPERATSSESMRAVWKLPRLQNLIMQHVDHSAGDLIDLLQGLLCYDPTERLKARE
ALRHPFFTRDLRRCGYPM

Transcript Sequence

Gene sequence data has not been registered.